[JAMESII-346] SR Tau-Leaping and reaction orders greater than 3 Created: 24/Apr/13  Updated: 24/Apr/13

Status: Open
Project: James II
Component/s: SR
Affects Version/s: None
Fix Version/s: None

Type: New Feature Priority: Minor
Reporter: Tobias Helms Assignee: Tobias Helms
Resolution: Unresolved Votes: 0
Labels: None
Remaining Estimate: Not Specified
Time Spent: Not Specified
Original Estimate: Not Specified


 Description   

The current implementation of the g function in tau-leaping for SR (TauLeapingProcessorVarA.java, line 562-607) uses the method of Cao (2006, Efficient step size selection for the tau-leaping simulation method, http://dx.doi.org/10.1063/1.2159468 ), but Sandmann (2009, Streamlined formulation of adaptive explicit-implicit tau-leaping with automatic tau selection, http://dx.doi.org/10.1109/WSC.2009.5429309 ) developed a more general equation which is able to deal with higher orders of reactions. This method should be implemented for SR.


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